Non-globular proteins in the era of Machine Learning

COST Action CA21160

ML4NGP WORKSHOP

THIS EVENT HAS PASSED.

Workshop on Structural Ensembles of Intrinsically Disordered Proteins

May 07-08 2023

Prague, Czech Republic

Panoramic view of Prague, Czech Republic (royalty free images).

DESCRIPTION

The workshop on “Structural Ensembles of Intrinsically Disordered Proteins” specifically focused on three main aspects: (1) Experimental determination by Nuclear Magnetic Resonance, (2) Structural ensemble generation and (3) Structural ensemble comparison and validation. Leading experts joined to discuss the current knowledge and recent techniques and approaches.

Group photo with the participants of the first ML4NGP workshop held in Prague, Czech Republic from 7 to 8 May 2023.

Participants

  • Juan Cortes,LAAS-CNRS, France
  • Wim Vranken, Vrije Universiteit Brussel, Belgium
  • Pavel Kadeřávek, CEITEC – Central European Institute of Technology, Czech Republic
  • Michele Vendruscolo, University of Cambridge, UK
  • Jiri Vondrasek, Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Czech Republic
  • Zsuzanna Dosztanyi, Eötvös Loránd University, Hungary
  • Gabor Erdos, Eötvös Loránd University, Hungary
  • Peter Tompa, VIB-VUB Brussels, Belgium
  • Kamil Tamiola, Peptone Ltd., Switzerland
  • Lukas Zidek, CEITEC – Central European Institute of Technology, Czech Republic
  • Benjamin Schuler, University of Zurich, Switzerland
  • Marco Schiavina, CERM, Italy
  • Alexander Monzon, University of Padova, Italy
  • Silvio Tosatto, University of Padova, Italy
  • Hamid Ghafouri, University of Padova, Italy
  • Frans Mulder, Johannes Kepler University Linz, Austria

PROGRAM

MAY 07, 2023

9:00 – 9:15

Registration & Welcome desk

Sign the COST Action attendance sheet

9:15 – 9:30

Welcome Note – Chair: Silvio Tosatto

Introduction & frame setting 

  • Jiří Vondrášek, IOCB Prague 
  • Alexander Monzon, University of Padova, Italy
  • Hamid Ghafouri, University of Padova, Italy

9:30 – 10:00

Tour de table and discussion of overall approach

Session 1: Experimental determination (NMR)  – Chair: Michele Vendruscolo

10:00 – 11:00

Short talks (5 min):

  • Lukas Zidek, CEITEC, Czech Republic
  • Marco Schiavina, CERM, Italy
  • Frans Mulder, Johannes Kepler University Linz, Austria
  • Benjamin Schuler, University of Zurich, Switzerland

Q&A

11:00 – 11:30

Coffee break

11:30 – 13:00

Discussion

13:00 – 14:30

Lunch break

Session 2: Structural ensemble generation – Chair: Ben Schuler

14:30 – 16:00

Short talks (5 min):

  • Michele Vendruscolo, University of Cambridge, UK
  • Juan Cortes,LAAS-CNRS, France
  • Kamil Tamiola, Peptone Ltd., Switzerland
  • Pavel Kadeřávek, CEITEC, Czech Republic

Q&A

16:00 – 16:30

Coffee break

16:30 – 18:00

Discussion

MAY 08, 2023

Session 3: Structural ensemble comparison and validation – Chair: Peter Tompa

9:30 – 11:00

Short talks (5 min):

  • Peter Tompa, VIB-VUB Brussels, Belgium
  • Zsuzsanna Dosztanyi, Eötvös Loránd University, Hungary
  • Wim Vranken, Vrije Universiteit Brussel, Belgium
  • Frans Mulder, Johannes Kepler University Linz, Austria
  • Juan Cortes,LAAS-CNRS, France

Q&A

11:00 – 11:30

Coffee break

11:30 – 13:00

Discussion

13:00 – 14:30

Lunch break

14:30 – 16:00

Future activities and paper writing

Location & venue

The 1ST ML4NGP workshop took place at Vila Lanna in Prague, Czech Republic.  

VENUE

Vila Lanna

V Sadech 1, 160 00 Praha 6 – Bubeneč

recepce@vila-lanna.cz | +420 224 321 278

ORGANIZATION

Scientific COMMITTEE

Alexander Monzon, Department of Information Engineering, University of Padova, Italy
Silvio Tosatto, Department of Biomedical Sciences, University of Padova, Italy
Jiří Vondrášek, Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Czech Republic

LOCAL ORGANIZING COMMITTEE

Jiří Vondrášek, IOCB Prague
Anna Strachotová, IOCB Prague

This event is part of the activities of the COST Action ML4NGP, CA21160, supported by COST (European Cooperation in Science and Technology).