Non-globular proteins in the era of Machine Learning COST Action CA21160 Outputs publications Escobedo, N., et al., Combining Protein Conformational Diversity and Phylogenetic Information Using CoDNaS and CoDNaS-Q. Curr Protoc, 2023. 3(5): p. e764 Del Conte, A., et al., CAID prediction portal: a comprehensive service for predicting intrinsic disorder and binding regions in proteins. Nucleic Acids Res, 2023. 51(W1): p. W62-W69 Arrias, P.N., et al., The repetitive structure of DNA clamps: An overlooked protein tandem repeat. J Struct Biol, 2023. 215(3): p. 108001 Del Conte, A., et al., Critical assessment of protein intrinsic disorder prediction (CAID) – Results of round 2. Proteins, 2023 Monzon, A.M., et al., A STRP-ed definition of Structured Tandem Repeats in Proteins. J Struct Biol, 2023: p. 108023 Garcia-Pardo, J., et al. A3DyDB: exploring structural aggregation propensities in the yeast proteome. Microb Cell Fact, 2023. 22, p186 Ghafouri, H., et. al, PED in 2024: improving the community deposition of structural ensembles for intrinsically disordered proteins. Nucleic Acids Res, 2023 Aspromonte M.C., et al. DisProt in 2024: improving function annotation of intrinsically disordered proteins. Nucleic Acids Res, 2023 Garcia-Pardo J., Ventura S. Cryo-EM structures of functional and pathological amyloid ribonucleoprotein assemblies. Trends Biochem Sci. 2023 Vasović LM, et al., Intrinsically disordered proteins and liquid-liquid phase separation in SARS-CoV-2 interactomes. J Cell Biochem, 2023 Mier P, Andrade-Navarro MA. The nucleotide landscape of polyXY regions. Comput Struct Biotechnol J., 2023 Bondarev SA, et al., AmyloComp: A Bioinformatic Tool for Prediction of Amyloid Co-aggregation. J Mol Biol, 2024 Bartolomé-Nafría, A., García-Pardo, J., & Ventura, S. Mutations in human prion-like domains: pathogenic but not always amyloidogenic. Prion, 2024 NEWSLETTERS ML4NGP Newsletter, 1st edition “First Year in Review”, 2023 ML4NGP Newsletter, 2nd edition “ML4NGP meeting”, 2024 deliverables ML4NGP Handbook of Operations v1 ML4NGP Science Communication, Dissemination and Exploitation Plan v1 TRAINING ACTIONS & MOBILITY TRAINING SCHOOLS 2 CONFERENCES 2 WORKSHOPS 2 ITC CONFERENCE GRANTS 7 SHORT TERM SCIENTIFIC MISSIONS 10
